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GC Health
Diagnosing Instrument Issues

 

Article written by Jamie Hoban, Organics Quality Control Technician, Analytical Products Group

Complete Article from Edition 20 APG eNewsletter

Habitual monitoring of the GC baseline signal will lead to longer uptime and better quality data. Important attributes of the baseline are background level, drift, and noise. Each of these can provide useful information and aid in diagnosing instrument problems. The focus of this article is use of the baseline to diagnose and correct leaks in GC/ECD analysis.

Baseline Drift
ECD baselines showing drift, or a wandering effect, are often an indication of leaks or pressure control issues. More specifically, an uncommon rise or fall in baseline signal followed by recovery during the instrument run should cause high suspicion that leaks or pressure control issues are the cause.

Uncommon rise or fall in baseline signal followed by recovery during the instrument run

Leak Detection
A leak can occur at numerous places within the instrument but is most common in the sample’s flow path from introduction to signal collection. A leak detector should be used to quickly assess the issue. All accessible connections from the inlet to detector should be checked. If no issues are found using the leak detector, it is possible that the leak is too small to locate. In this case, There should be mild disruption of test chromatograms.

Quick Tip: Insulation covers within the GC oven can hide leaks.

Electronic leak detectors typically operate by thermal conductivity and are recommended for use during instrument maintenance. A quick Internet search returns many different hand-held or portable electronic leak detectors that are offered by instrument manufacturers and consumables suppliers.

Quick Tip: Using liquid or soap (Snoop®), to find leaks within the instrument often causes serious contamination problems.

Systematic Checking
It is best to begin systematic checking of all frequently accessed components if the leak detector is not successul in identify the issue. Any recent configuration changes or maintenance performed should be scrutinized first. The GC inlet (refer to the picture below) is a possible source of leaks due to periodic maintenance and re-assembly. Ensure that septa are changed as per the manufacturer's guidelines and that o-rings are not overused. Inlet liners must be free of cracks or chipped edges and properly suited to the instrument and application. Confirm that the nuts securing the top and bottom of the inlet are correctly secured.

GC inlet is a possible source of leaks

Quick Tip: Do not over-tighten GC inlet nuts. A standard guideline for tightening is finger tight plus and additional quarter turn.

GC Oven
Continued instrument use can lead to loosening of the fittings within the GC oven due to expansion and contraction during oven cycles. These can include column connections to the inlet and detector, guard columns or retention gaps, and Y-connectors. The nut securing the ECD detector stem is susceptible to loosening as well (refer to the picture below). Each of these connections should be inspected for obvious issues, disconnected, and reassembled. It is important to always replace ferrules during this process, and discard the used ferrule.

nut securing the ECD detector stem is susceptible to loosening

Re-assembly
Remember to recheck each component and fitting during re-assembly using the leak detector. If baseline issues persist after following this method, contact the instrument support personnel. The issue may be related to a malfunctioning controller or a leak within the internal plumbing of the GC instrument.

Jamie Hoban may be reached by email at j.hoban@apgqa.com or by phone at 800.272.4442.

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